Physiology and Microbial Metabolism

PMM 2007

BOLTEN Ch .J.,  KIEFER P., LETISSE F., PORTAIS J.Ch., WITTMANN C.  Towards appropriate sampling for metabolome analysis of microorganisms.  Analytical Chemistry, 79, 3843-3849.

 

CHISTOSERDOVA L., CROWTHER G., VORHOLT JA., SKOVRAN E., PORTAIS JC., LIDSTROM ME. Identification of a fourth formate dehydrogenase in Methylobacterium extorquens AM1 and confirmation of the essential role of formate oxidation in methylotrophy. J. Bact. 2007 Oct 5; [Epub ahead of print] .

 

COT M., LORET M.O., FRANCOIS J., BENBADIS L.  Physiological behaviour of Saccharomyces cerevisiae in aerated fed-batch fermentation for high level production of bioethanol. FEMS Yeast Research, 7, 22-32.

 

CORDIEZ H., MENDES-SOARES F., TAILLADE P., VASCONCELOS I., FRANCOIS J.  Metabolic and genomic investigation of engineered Saccharomyces cerevisiae strains for high glycerol production. Metabolic Engineering, 9, 364-378.

 

DEMUEZ M., COURNAC L., GUERRINI O., SOUCAILLE Ph., GIRBAL L.  Complete activity profile of Clostridium acetobutylicum (FeFe)-hydrogenase and kinetic parameters for endogenous redox partners. FEMS Microbiol Lett. 275, 113-121.

 

FRISON M., PARROU JL., GUILLAUMOT D., MASQUELIER D., FRANCOIS J., CHAUMONT F., BATOKO H. The Arabidopsis thaliana trehalose is a plasma membrane-bound enzyme with extracellular activity. FEBS Lett., 581, 4010-4016.

 

KIEFER P., NICOLAS C., LETISSE F., PORTAIS J.Ch.  Determination of Carbon Labelling Distribution of Intracellular Metabolites from Single Fragment ions by ion Chromatography Tandem Mass Spectrometry. Analytical Biochemistry, 360, 182-188.

 

KOWALCZYK M., COCAIGN-BOUSQUET M., LOUBIERE P., BARDOWSKI J. (2007) Identification and functional characterization of cellobiose and lactose transport systems in Lactococcus lactis IL1403. Archives of Microbiology, on line 2007 Oct 2.

 

LORET M.O., PEDERSEN L., FRANCOIS J.  Revised procedures for yeast matabolites extraction : application to a glucose pulse to carbon-limited yeast cultures, which reveals a transient activation of the purine salvage pathway. Yeast, 24, 47-60.

 

MARULLO Ph., AIGLE M., BELY M., MASNEUF-POMARE  I., DURRENS P., DUBOURDIEU D., YVERT G.  Single QTL mapping and nucleotide-level resolution of a physiologic trait in wine Saccharomyces cerevisia strains. FEMS Yeast Res. 7, 941-952.

 

MARULLO P., YVERT G., BELY M., AIGLE M., DUBOURDIEU D. Efficient use of DNA molecular markers to construct industrial yeast strains. FEMS Yeast Res., 2007 Sep 20; [Epub ahead of print] PMID: 17888000.

 

MASSOU S., NICOLAS C., LETISSE F., PORTAIS J.Ch.  NMR-based fluxomics : quantitative 2D-NMR methods for isotopomer analysis. Phytochemistry, 68, 2330-2340.

 

MASSOU S., NICOLAS C., LETISSE F., PORTAIS J.Ch.  Application of 2D-TOCSY NMR to the measurement of specific 13C-enrichments in complex mixtures of  13C-labeled metabolites.  Metabolic Engineering, 9, 352-357.

 

MAZZOLI R., PESSIONE E., GIUFFRIDA M.G., FATTORI P., BARELLO C., GIUNTA C., LINDLEY N.D.  Degradation of aromatic compounds by Acinetobacter radioresistens S13 : growth characteristics on single substrates and mixtures. Archives of Microbiology, 188, 55-68.

 

MEYNIAL-SALLES I., FORCHAMMER N., CROUX C., GIRBAL L., SOUCAILLE P.  Evolution of a Saccharomices cerevisiae metabolic pathway in Escherichia coli. Metabolic Engineering, 9, 152-159.

 

MEYNIAL-SALLES I., DOROTYN S., SOUCAILLE P.  A new process for the continuous production of succinic acid from glucose at high yield, titer and productivity. Biotechnol. Bioeng. 2007 Jun 1; [Epub ahead of print] PMID: 17546688.

 

NICOLAS C, KIEFER P, LETISSE F, KROMER J, MASSOU S, SOUCAILLE P, WITTMANN C, LINDLEY ND, PORTAIS JC. Response of  central metabolism of Escherichia coli to modified expression of the gene encoding the glucose-6-phosphate dehydrogenase. FEBS Lett. 581, 3771-3776.

NICOLAS C., BECKER J., SANCHOU L., LETISSE F., WITTMANN C., PORTAIS JC., MASSOU S. Measurement of isotopic enrichments in 13C-labelled molecules by 1D selective Zero-Quantum Filtered TOSCY NMR experiments. Comptes-Rendus Chimie. In press .

 

NOGAMI S., OHYA Y., YVERT G.  Genetic complexity and QTL mapping of yeast morphological traits. PLOS Genetics, 3, Issue2/e31.

 

NOVO M., BELTRAN G., ROZES N., GUILLAMON J.M., LEBERRE V., FRANCOIS J., MAS A.  Early transcriptional response of wine yeast after rehydration : Osmotic shock and metabolic activation. FEMS Yeast Res., 7, 304-316 (SCI = 2,274)

 

TROUFFLARD S., ROSCHER A., THOMASSET B., BARBOTIN JN., RAWSTHORNE S., PORTAIS JC.  In vivo 13C-NMR determines metabolic fluxes and steady-state in linseed embryos. Phytochemistry, 68, 2341-2350.

 

VAN DER WERF MJ., TAKORS R., SMEDSGAARD J., NIELSEN J., FERENCI T., PORTAIS JC., WITTMANN C., HOOKS M., TOMASSINI A., STEPHANOPOLOUS G., OLDIGES M., FOSTEL J.,  SAUER U. Standard Reporting Requirements for Biological Samples in Metabolomics Experiments: Microbial and in vitro biology experiments. Metabolomics, 3, 189–194.

 

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